The detailed information of tRNA gene sequence


Sequence ID>WENV170980397
Genome IDMTKZ01139928
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1483
End posion on genome 1567
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttgcacccaa
tRNA gene sequence 
GCCCGGATGGCGGAATTGGTAGACGCGCTGGTCTCAAACACCAGTGGTAGCAATACTGTG
CCGGTTCGACCCCGGCTCCGGGTACtg
Downstream region at tRNA end position 
taacacagat
Secondary structure (Cloverleaf model)
>WENV170980397	Leu	CAA
                   a      ACtg taacacagat
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTAGCAATACTGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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