The detailed information of tRNA gene sequence


Sequence ID>WENV170980398
Genome IDMTKZ01139959
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 886
End posion on genome 814
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttacgttaa
tRNA gene sequence 
GGGCGAATAGCTCAGCGGTAGAGCACCTGCTTCACATGTAGGGGGTCACAGGTTCAAACC
CTGTTTCGCCCACtc
Downstream region at tRNA end position 
agaaaagagt
Secondary structure (Cloverleaf model)
>WENV170980398	Val	CAC
                   a      ACtc agaaaagagt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          C A
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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