The detailed information of tRNA gene sequence


Sequence ID>WENV170980402
Genome IDMTKZ01140279
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 468
End posion on genome 543
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
caaattctgT
tRNA gene sequence 
GCACCCGTAGCTTAATTGGATAGAGCATTGGTTTGCGGAACCAAAGGTTGACGGTTCGAT
TCCGTCCGGGTGCGTtt
Downstream region at tRNA end position 
tttcacttta
Secondary structure (Cloverleaf model)
>WENV170980402	Arg	GCG
                   T      GTtt tttcacttta
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C T G C C     A
      T A A        A      | | | | |     G
    T       T T C G       G A C G G     C
    G       + | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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