The detailed information of tRNA gene sequence


Sequence ID>WENV170980406
Genome IDMTKZ01140423
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 588
End posion on genome 498
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcactcccac
tRNA gene sequence 
GGAGAGATGCTCGAGTGGCTGAAGAGGCACGCCTGGAAAGCGTGTGTACGCCAAAAGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCTA
Downstream region at tRNA end position 
ggtgcggaaa
Secondary structure (Cloverleaf model)
>WENV170980406	Ser	GGA
                   c      GCTA ggtgcggaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TGTACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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