The detailed information of tRNA gene sequence


Sequence ID>WENV170980413
Genome IDMTKZ01141252
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1015
End posion on genome 924
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaatgatat
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGATTGGGGCCGCCTGCTAAGCGGTTGCCGGAGTAGAATTC
GGCCCAGGGTTCGAATCCCTGCCTCCCCGCCT
Downstream region at tRNA end position 
tcaaaaactg
Secondary structure (Cloverleaf model)
>WENV170980413	Ser	GCT
                   t      GCCT tcaaaaactg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGCCGGAGTAGAATTCGGCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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