The detailed information of tRNA gene sequence


Sequence ID>WENV171002329
Genome IDNHNJ01000145
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 260
End posion on genome 189
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnngttcg
tRNA gene sequence 
GGGCGATTAGCACAGTGGTAGCGCACTTCCTTCACACGGAAGGGGTCACTGGTTCGAATC
CAGTATCGCCCAtta
Downstream region at tRNA end position 
aatcttttaa
Secondary structure (Cloverleaf model)
>WENV171002329	Val	CAC
                   g      Atta aatcttttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     G
      T     C A C G       A C T G G     C
      G     |   | |                 T T
      G     G C G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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