The detailed information of tRNA gene sequence


Sequence ID>WENV171002344
Genome IDNHNJ01003639
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 268
End posion on genome 193
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atacttatac
tRNA gene sequence 
GGCCCCGTCGTCCAGAGGCCTAGGACGCTGGGTTTTCAACCCAGAAACGCCGGTTCGAAT
CCGGTCGGGGCTGCCA
Downstream region at tRNA end position 
tctttcgggg
Secondary structure (Cloverleaf model)
>WENV171002344	Glu	TTC
                   c      GCCA tctttcgggg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      A G A        C      + | | | |     G
    G       C C T G       G C C G G     C
    G       | | | |                 T T
    C       G G A C
      C T A        G     AAAC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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