The detailed information of tRNA gene sequence


Sequence ID>WENV171002353
Genome IDNHNJ01004739
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 218
End posion on genome 141
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagcaacttT
tRNA gene sequence 
GGTCCCATAGCTCAGTTGGTTAGAGCATCTGACTCATAATCAGAGGGTCCTTGGTTCGAG
CCCAAGTGGGACCACCC
Downstream region at tRNA end position 
tgaaaaccct
Secondary structure (Cloverleaf model)
>WENV171002353	Met	CAT
                   T      ACCC tgaaaaccct
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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