The detailed information of tRNA gene sequence


Sequence ID>WENV171002364
Genome IDNHNJ01007315
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 234
End posion on genome 158
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcaccctgt
tRNA gene sequence 
GGCGGGGTAGCTCAGGTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCCGGGGTTCAAG
TCCCTGTCCCGCTACCA
Downstream region at tRNA end position 
ttattcttaa
Secondary structure (Cloverleaf model)
>WENV171002364	Met	CAT
                   t      ACCA ttattcttaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     G T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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