The detailed information of tRNA gene sequence


Sequence ID>WENV171002385
Genome IDNHNJ01016729
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 14
End posion on genome 87
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cacatcaggc
tRNA gene sequence 
GGCGAGTTGGCGGAGTGGTGACGCAGCGGATTGCAAATCCGTGTACACCGGTTCGATTCC
GGTACTCGCCTCCA
Downstream region at tRNA end position 
gagtaatact
Secondary structure (Cloverleaf model)
>WENV171002385	Cys	GCA
                   c      TCCA gagtaatact
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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