The detailed information of tRNA gene sequence


Sequence ID>WENV171002443
Genome IDNHNJ01043551
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 1242
End posion on genome 1153
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcatataac
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTGAACGCATCAGTCTTGAAAACTGACAAGGGTGCAAGCCCT
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
cgcttactaa
Secondary structure (Cloverleaf model)
>WENV171002443	Ser	TGA
                   c      GCCA cgcttactaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G           | |                 T T
    T       A C G C
      T G A        A     CAAGGGTGCAAGCCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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