The detailed information of tRNA gene sequence


Sequence ID>WENV171002460
Genome IDNHNJ01045641
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 559
End posion on genome 485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgaggttat
tRNA gene sequence 
GGCTCGGTAGCTCAGCTGGTTAGAGCGTGGGATTCATAACCCCAAGGTCGGGAGTTCAAG
TCTCCCCCGAGCCACtt
Downstream region at tRNA end position 
ttttgaagtt
Secondary structure (Cloverleaf model)
>WENV171002460	Met	CAT
                   t      ACtt ttttgaagtt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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