The detailed information of tRNA gene sequence


Sequence ID>WENV171002480
Genome IDNHNJ01051029
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 222
End posion on genome 296
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaagctat
tRNA gene sequence 
GGCTCGGTAGCTCAGCTGGTTAGAGCGTGGGATTCATAACCCCAAGGTCGGGAGTTCAAG
TCTCCCCCGAGCCACtt
Downstream region at tRNA end position 
atctgcgttg
Secondary structure (Cloverleaf model)
>WENV171002480	Met	CAT
                   t      ACtt atctgcgttg
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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