The detailed information of tRNA gene sequence


Sequence ID>WENV171002494
Genome IDNHNJ01058557
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 575
End posion on genome 504
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttgcattcg
tRNA gene sequence 
GGGCGATTAGCACAGTGGTAGCGCACTTCCTTCACACGGAAGGGGTCACTGGTTCGAATC
CAGTATCGCCCAtta
Downstream region at tRNA end position 
aatctgttga
Secondary structure (Cloverleaf model)
>WENV171002494	Val	CAC
                   g      Atta aatctgttga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     G
      T     C A C G       A C T G G     C
      G     |   | |                 T T
      G     G C G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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