The detailed information of tRNA gene sequence


Sequence ID>WENV171002499
Genome IDNHNJ01063113
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 178
End posion on genome 104
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acccagcaac
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACAGCTGGTTTTCATCCTGCAAAGGGGGGTTCGATTC
CCCCAGGGACCGCCA
Downstream region at tRNA end position 
tttatgcctt
Secondary structure (Cloverleaf model)
>WENV171002499	Glu	TTC
                   c      GCCA tttatgcctt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    G - C
                    C - G
                    T   T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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