The detailed information of tRNA gene sequence


Sequence ID>WENV171002515
Genome IDNHNJ01073085
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 237
End posion on genome 148
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgccttta
tRNA gene sequence 
GGACAGTTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCGAGGGTTCGAATCCCTCACTGTCCGCCA
Downstream region at tRNA end position 
ttaaaattca
Secondary structure (Cloverleaf model)
>WENV171002515	Ser	GGA
                   a      GCCA ttaaaattca
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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