The detailed information of tRNA gene sequence


Sequence ID>WENV171002657
Genome IDNHNJ01121205
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 187
End posion on genome 98
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catcgatttc
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGAAAGCGCCTCCCTGCTAAGGAGGTATATGGGTAACTGTA
TCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
gacatcaaaa
Secondary structure (Cloverleaf model)
>WENV171002657	Ser	GCT
                   c      GCCA gacatcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATATGGGTAACTGTATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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