The detailed information of tRNA gene sequence


Sequence ID>WENV171002799
Genome IDNHNJ01173382
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 375
End posion on genome 284
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgcaagcct
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCTAAAGCGCTCGCCTGCTAAGCGAGTGGGGGATGAAAGTCC
CCTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgcgcctgta
Secondary structure (Cloverleaf model)
>WENV171002799	Ser	GCT
                   t      GCCA tgcgcctgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGGGGGATGAAAGTCCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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