The detailed information of tRNA gene sequence


Sequence ID>WENV171002884
Genome IDNHNJ01199054
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 396
End posion on genome 305
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggtaaaaat
tRNA gene sequence 
GGAAGAGTGGGTGAGCGGTTGAAACCAGTTGGTTGCTAACTAACCGTACGAGTAACATCG
TACCGAGAGTTCGAATCTCTCCTCTTCCGCCA
Downstream region at tRNA end position 
aaaattagtt
Secondary structure (Cloverleaf model)
>WENV171002884	Ser	GCT
                   t      GCCA aaaattagtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGTACGAGTAACATCGTACC
                    G - C
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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