The detailed information of tRNA gene sequence


Sequence ID>WENV171002903
Genome IDNHNJ01201518
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 107
End posion on genome 180
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgttgttgat
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAAT
CCGCTTGGCTCCACtc
Downstream region at tRNA end position 
agtatttccc
Secondary structure (Cloverleaf model)
>WENV171002903	Ala	GGC
                   t      ACtc agtatttccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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