The detailed information of tRNA gene sequence


Sequence ID>WENV171002938
Genome IDNJIW01001158
Search identical group
Phylum/Class[NJIW] biofilm metagenome; Green berry consortia from Sippewissett Salt Marsh
Species
Start position on genome 142
End posion on genome 53
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaagaactt
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCTAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAAACCGTC
TCCAGGGTTCGAATCCCTGTCGCTCCGCCA
Downstream region at tRNA end position 
ttttcatcac
Secondary structure (Cloverleaf model)
>WENV171002938	Ser	GGA
                   t      GCCA ttttcatcac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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