The detailed information of tRNA gene sequence


Sequence ID>WENV171002942
Genome IDNJIW01001711
Search identical group
Phylum/Class[NJIW] biofilm metagenome; Green berry consortia from Sippewissett Salt Marsh
Species
Start position on genome 488
End posion on genome 416
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
caaattccct
tRNA gene sequence 
GCCACGTTAGCTCAGTTGGTAGAGCACATCACTCGTAATGATGGGGTCGTGAGTTCAAGT
CTCATACGTGGCTtac
Downstream region at tRNA end position 
tgtcagaggc
Secondary structure (Cloverleaf model)
>WENV171002942	Thr	CGT
                   t      Ttac tgtcagaggc
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C
                     T - A          T G
                    T     T A C T C     A
      T G A        A      + | | | |     A
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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