The detailed information of tRNA gene sequence


Sequence ID>WENV171002955
Genome IDNJIW01003863
Search identical group
Phylum/Class[NJIW] biofilm metagenome; Green berry consortia from Sippewissett Salt Marsh
Species
Start position on genome 1463
End posion on genome 1537
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcaaactaT
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCAAGT
CCTCCAGGGCGTGTta
Downstream region at tRNA end position 
taaacttagg
Secondary structure (Cloverleaf model)
>WENV171002955	Trp	CCA
                   T      GTta taaacttagg
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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