The detailed information of tRNA gene sequence


Sequence ID>WENV171002959
Genome IDNJIW01004244
Search identical group
Phylum/Class[NJIW] biofilm metagenome; Green berry consortia from Sippewissett Salt Marsh
Species
Start position on genome 387
End posion on genome 314
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgctgtttaa
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGTAGCGCACTTCGTTCGGGACGAAGGGGCCGCTGGTTCGAA
TCCAGTCATCCCGAttt
Downstream region at tRNA end position 
ttattaaaca
Secondary structure (Cloverleaf model)
>WENV171002959	Pro	CGG
                   a      Attt ttattaaaca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    T       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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