The detailed information of tRNA gene sequence


Sequence ID>WENV171002968
Genome IDNKIC01000118
Search identical group
Phylum/Class[NKIC] algae metagenome; Clonal culture of Asterionella formosa BG1 isolated from Esthwaite Water
Species
Start position on genome 17
End posion on genome 107
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgtgtgtgc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTGCTAAATGAGCGTGCTCCAAAAGGGC
ACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gttacctgtt
Secondary structure (Cloverleaf model)
>WENV171002968	Ser	GCT
                   c      GCCA gttacctgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTGCTCCAAAAGGGCACC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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