The detailed information of tRNA gene sequence


Sequence ID>WENV171002981
Genome IDNKIC01001235
Search identical group
Phylum/Class[NKIC] algae metagenome; Clonal culture of Asterionella formosa BG1 isolated from Esthwaite Water
Species
Start position on genome 498
End posion on genome 411
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcagt
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGTCTGTAACAGGACC
TGGGGTTCGAATCCCTAACTCTCCGCCA
Downstream region at tRNA end position 
caaaacagta
Secondary structure (Cloverleaf model)
>WENV171002981	Ser	TGA
                   t      GCCA caaaacagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTCTGTAACAGGACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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