The detailed information of tRNA gene sequence


Sequence ID>WENV171003061
Genome IDNKIC01008297
Search identical group
Phylum/Class[NKIC] algae metagenome; Clonal culture of Asterionella formosa BG1 isolated from Esthwaite Water
Species
Start position on genome 80
End posion on genome 172
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctgcgatcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTACTGGTAAATCCG
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gcgcttaaat
Secondary structure (Cloverleaf model)
>WENV171003061	Ser	GCT
                   c      GCCA gcgcttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTGGTAAATCCGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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