The detailed information of tRNA gene sequence


Sequence ID>CL171000011
Genome IDCP002988
Search identical group
Phylum/ClassEuryarchaeota
Specieshalophilic archaeon DL31 [CP002988]
Start position on genome 2249241
End posion on genome 2249141
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attcgggtga
tRNA gene sequence 
GGGCACGTAGCTCAGTTGGACAGAGCGTCGGACTTCTAATCCGGTGGTCGTGGGTTCGAA
TCCCACCGTGCCCGtac
Downstream region at tRNA end position 
gaccgccgag
Secondary structure (Cloverleaf model)
>CL171000011	Arg	TCT
                   a      Gtac gaccgccgag
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        G     TGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T C T
intron: position=38, length=27 (in A-loop)
ACCCCGGAGGTCCCCACGGGGGGAGCC
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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