The detailed information of tRNA gene sequence


Sequence ID>CL171000017
Genome IDCP010424
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR10 [CP010424]
Start position on genome 179762
End posion on genome 179672
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aggattaaga
tRNA gene sequence 
GGACCCGTAGCCTAGTGGATAGGGCAGCTGCCTTCTAAGCAGCAGGTCGAGGGTTCGAAT
CCCTCCGGGTCCGCtt
Downstream region at tRNA end position 
tgacacgcaa
Secondary structure (Cloverleaf model)
>CL171000017	Arg	TCT
                   a      GCtt tgacacgcaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       T C C G       G A G G G     C
    G       + | | |                 T T
    A       G G G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=17 (in A-loop)
ATGCTTCCACGGAGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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