The detailed information of tRNA gene sequence


Sequence ID>CL171000019
Genome IDCP014049
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio vulnificus FDAARGOS_119 [CP014048, CP014049]
Start position on genome 1841864
End posion on genome 1841551
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcaaaataaa
tRNA gene sequence 
GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGAA
TCCTACAGGGCGTGCCA
Downstream region at tRNA end position 
ctttgaagag
Secondary structure (Cloverleaf model)
>CL171000019	Arg	TCT
                   a      GCCA ctttgaagag
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=237 (in A-loop)
ATTGGCTAGATTTCTCTAGCGTTCAGATTGGGCCTCTTTTTGGAAACGATAAGAGTGTAAGACATCAAAT
TCGGGGAAACCTTACTTTAATGAGTTGGCAATCCCGAGCCAAGCCCAGTAATTCTGGGAAGGTGTAGAGA
CTAGACGGTGTCTACCTAAAGCTTTCAAAGCTATGGTAAAGGTATAGTCCAGCGCACAAAGCCTTAAGAG
GTGGTAGCGAAAGCTATAGTGTGACGA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK