The detailed information of tRNA gene sequence


Sequence ID>CL171800016
Genome IDCP010424
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR10 [CP010424]
Start position on genome 738363
End posion on genome 738498
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caaaaatgat
tRNA gene sequence 
GCCCTGGTAGTCTAGCGGTTAGGATTCACCCCTGTCACGGGTGAGACTCGGGTTCGAGTC
CCGGCCAGGGCGCta
Downstream region at tRNA end position 
gcttaaactg
Secondary structure (Cloverleaf model)
>CL171800016	Asp	GTC
                   t      GCta gcttaaactg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      + | | | |     G
    G       T C T G       T C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          T     AGAC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G T C
intron: position=38, length=63 (in A-loop)
TGGCCCTGTTCTTCTCGAAAGAAAGGCCTTGGGAAAAATAAGCCTGAGGAAAGGGCTACTGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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