The detailed information of tRNA gene sequence


Sequence ID>CL171100015
Genome IDCP010424
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR10 [CP010424]
Start position on genome 1187101
End posion on genome 1186944
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttaccgtttc
tRNA gene sequence 
GCTGGGGTGGCAGATCGGCCATGCATCCGCCTGCAGAGCGGAAGAGATGGGTTCGACTCC
CATCCTCAGCTCtc
Downstream region at tRNA end position 
ttcgtttgca
Secondary structure (Cloverleaf model)
>CL171100015	Cys	GCA
                   c      TCtc ttcgtttgca
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T
                     G - C
                     G - C          T C
                    T     T A C C C     A
        T A        G      | | | | |     G
      C     G A C G       A T G G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     AGAG
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C A
intron: position=38, length=86 (in A-loop)
AAACTTTTCTTTAGAAAAGAAAAGTTTACAAAAGAAAGCAAAAGAAAGCAAAAGAAAGCTGTCTTTTGCA
GCTTTTGGTTGCTGTA
Intron
Comment/Decision
Genome/Seq. Info.-

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