The detailed information of tRNA gene sequence


Sequence ID>CL171500013
Genome IDCP010424
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR10 [CP010424]
Start position on genome 47460
End posion on genome 47576
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ttacgattcT
tRNA gene sequence 
AGCCCCATAGTCTAGCGGCCAAGGATACAGGGCTTTGGACCCTGTGACAGGAGTTCGAAT
CTCCTTGGGGCTATtt
Downstream region at tRNA end position 
ttttaaactc
Secondary structure (Cloverleaf model)
>CL171500013	Gln	TTG
                   T      ATtt ttttaaactc
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | +                 T T
    C       G G A T
      C A A        A     TGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    T T G
intron: position=38, length=42 (in A-loop)
TCAAAGCTTGCTTTGGTTCGCCAAGATAGGCTCTTGGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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