The detailed information of tRNA gene sequence


Sequence ID>VRL181000028
Genome IDHM004429
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesMicromonas sp. RCC1109 virus MpV1 (HM004429)
Start position on genome 138325
End posion on genome 138398
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gggagcttaa
tRNA gene sequence 
CCTCTCTTAGCTCAGTTGGGAGAGCAGTGGACTGTAGTTCCAAGGGTCAGGTGTTCGATT
CACCTAGAGAGGACtt
Downstream region at tRNA end position 
tttcttccat
Secondary structure (Cloverleaf model)
>VRL181000028	Tyr	GTA
                   a      ACtt tttcttccat
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     C - G
                     T - A          T T
                    T     T C C A C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G T G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    G   A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       T
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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