The detailed information of tRNA gene sequence


Sequence ID>VRL181000036
Genome IDHM004432
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesBathycoccus sp. RCC1105 virus BpV1 (HM004432)
Start position on genome 131980
End posion on genome 132055
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgcgaccccT
tRNA gene sequence 
TCTCTCGTAACTCAGTTGGTTAGAGTGTGCGACTGTTAATCGCGAAGTCACCGGTTCAAC
TCCGGTCGAGAGAGTtt
Downstream region at tRNA end position 
ttacaaatct
Secondary structure (Cloverleaf model)
>VRL181000036	Asn	GTT
                   T      GTtt ttacaaatct
                     T - A
                     C - G
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C A       A C C G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        G     AAGTC
                    T + G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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