The detailed information of tRNA gene sequence


Sequence ID>VRL181000038
Genome IDHQ336222
Search identical group
Phylum/ClassMimiviridae
SpeciesAcanthamoeba polyphaga mimivirus (HQ336222)
Start position on genome 352275
End posion on genome 352346
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acagtcaact
tRNA gene sequence 
GGATCGTTAGCTCAATGGTAGAGCGCTCGCCTGCAGAGCGATAGGTTATCAGTTCAATTC
TGATACGATCCTttt
Downstream region at tRNA end position 
tagatgtata
Secondary structure (Cloverleaf model)
>VRL181000038	Cys	GCA
                   t      Tttt tagatgtata
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T A G T C     A
        A A        A      | | | | |     A
      T     C T C G       A T C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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