The detailed information of tRNA gene sequence


Sequence ID>VRL181000295
Genome IDJX997176
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NE-JV-1 (JX997176)
Start position on genome 230416
End posion on genome 230488
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taaacgcaca
tRNA gene sequence 
GGCCGCGTAGCTTAGTGGAAAAAGCGTCTCGCTTCTAACGAGAAGATCGCGAGTTCAAAT
CTCGCCGTGGTCGtgc
Downstream region at tRNA end position 
caagcgggta
Secondary structure (Cloverleaf model)
>VRL181000295	Arg	TCT
                   a      Gtgc caagcgggta
                     G - C
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     A
    G       T T C G       G C G A G     C
    G       | | | |                 T T
    A       A A G C
      A A          G     AGATC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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