The detailed information of tRNA gene sequence


Sequence ID>VRL181000339
Genome IDJX997182
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NY-2B (JX997182)
Start position on genome 169514
End posion on genome 169586
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position
aaacgcagca
tRNA gene sequence
GTTCGCTTAGCTCAGTGGTTAGAGCATTGGTCTTATGAGCCAAGGGTCACCGGTTCGATC
CCGGTAGCGAACAaag
Downstream region at tRNA end position
tcggcggact
Secondary structure (Cloverleaf model)
>VRL181000339	Ile	TAT
                   a      Aaag tcggcggact
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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