The detailed information of tRNA gene sequence


Sequence ID>VRL181000349
Genome IDJX997184
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus OR0704.2.2 (JX997184)
Start position on genome 118135
End posion on genome 118210
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctaaacgcat
tRNA gene sequence 
GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC
CCCGCCAGAGACGCCA
Downstream region at tRNA end position 
ggatgtgtga
Secondary structure (Cloverleaf model)
>VRL181000349	Arg	TCT
                   t      GCCA ggatgtgtga
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          C C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       C G C G       G C G G G     C
    G       | | | |                 T T
    A       G C G C
      C A          G     AGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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