The detailed information of tRNA gene sequence


Sequence ID>VRL181000500
Genome IDAP017644
Search identical group
Phylum/ClassMimiviridae
SpeciesAcanthamoeba castellanii mimivirus Mimivirus kasaii (AP017644)
Start position on genome 1131318
End posion on genome 1131388
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgcaacaata
tRNA gene sequence 
GACCTGTTAGTTTAATGGTAAAACGGTAGCCTCCAGAGTGATTGATACTGGTTCGATTCC
GGTATAGGTCCatt
Downstream region at tRNA end position 
taataaaaaa
Secondary structure (Cloverleaf model)
>VRL181000500	Trp	CCA
                   a      Catt taataaaaaa
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G + T
                     T - A          T T
                    T     T G G C C     A
        A A        A      | | + | |     G
      T     T T T G       A C T G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     TGAT
                    G + T
                    T - A
                    A   G
                    G + T
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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