The detailed information of tRNA gene sequence


Sequence ID>VRL181000702
Genome IDMF405918
Search identical group
Phylum/ClassVaridnaviria
SpeciesTupanvirus deep ocean (MF405918)
Start position on genome 148731
End posion on genome 148656
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atggtttttt
tRNA gene sequence 
GGCCGCATAGTGTAGTGGATTTCTGCACGCCTCGTTGTCAGCGAGGAAGTCCGAGTTCGA
TTCTCGGTGTGGTCGCgc
Downstream region at tRNA end position 
ctggttcgta
Secondary structure (Cloverleaf model)
>VRL181000702	Asp	GTC
                   t      GCgc ctggttcgta
                     G - C
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     A - T          T T
                    T     G G C T C     A
    G T G A        A      | | | | |     G
  G         T G T G       C C G A G     C
  A         + | | |                 T T
  T         G C A C
    T T C T        G     AAGT
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       G
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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