The detailed information of tRNA gene sequence


Sequence ID>VRL181000704
Genome IDMF405918
Search identical group
Phylum/ClassVaridnaviria
SpeciesTupanvirus deep ocean (MF405918)
Start position on genome 146517
End posion on genome 146446
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
taatactaaa
tRNA gene sequence 
GGGCTAATGGTGTTAATGGTAACACATCTCGTTAGCAACGAGAAGATCCGAGTTCGATTC
TCGGTTGGTCCAtgt
Downstream region at tRNA end position 
tctcttggtg
Secondary structure (Cloverleaf model)
>VRL181000704	Ala	AGC
                   a      Atgt tctcttggtg
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     A - T
                     A - T          T T
                    T     G G C T C     A
      A A T        G      | | | | |     G
    T       T G T G       C C G A G     C
    G       | | | |                 T T
    G       A C A C
      T A          A     AGAT
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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