The detailed information of tRNA gene sequence


Sequence ID>PL191000035
Genome IDCP000489
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)
Start position on genome 361057
End posion on genome 361146
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acggggcagc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCACACCCCTGCTAAGGGTGCAGGCGGGAAACCGCC
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
tccccatgca
Secondary structure (Cloverleaf model)
>PL191000035	Ser	GCT
                   c      GCCA tccccatgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CAGGCGGGAAACCGCCTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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