The detailed information of tRNA gene sequence


Sequence ID>PL191000069
Genome IDCP000489
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)
Start position on genome 1274493
End posion on genome 1274404
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgacccggct
tRNA gene sequence 
GGAAGCGTGGCCGAGTGGTTTAAGGCTCTGGTCTTGAAAACCAGCGTGGGGGAGACCCCA
CCGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
tttcaccaaa
Secondary structure (Cloverleaf model)
>PL191000069	Ser	TGA
                   t      GCCA tttcaccaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        T     CGTGGGGGAGACCCCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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