The detailed information of tRNA gene sequence


Sequence ID>PL191000214
Genome IDCP013103
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia caribensis MWAP64 plasmid: (CP013103)
Start position on genome 893416
End posion on genome 893322
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
aggcgtcaac
tRNA gene sequence 
GGAAGGCATTCGTATCTGGTGGTGCGGCTGGGCTTCAAACCCAGTAGGGGGTGTCAGCCA
CTCTCTGGTCGGTTCGACTCCGGCTGCCTTCCGCCc
Downstream region at tRNA end position 
caagggttgt
Secondary structure (Cloverleaf model)
>PL191000214	Sec	TCA
                   c      GCCc caagggttgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G C C     A
      T C T        T      | + | | |     G
    G       A T G C       G T C G G     C
    G       | + | |                 T T
    T       T G C G
      G G          G     TAGGGGGTGTCAGCCACTCTCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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