The detailed information of tRNA gene sequence


Sequence ID>PL191000252
Genome IDCP021084
Search identical group
Phylum/ClassDeinococcus-Thermus
SpeciesDeinococcus ficus CC-FR2-10 plasmid:pDFI3 (CP021084)
Start position on genome 304379
End posion on genome 304453
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcaccaacgt
tRNA gene sequence 
GGTTCCGTAGCGCAGGGGGAGCGCACCCGGTTGTCAGCCGGAAGGTCGCGGGTTCAAATC
CCGTCGGGACCGCCA
Downstream region at tRNA end position 
aattttccag
Secondary structure (Cloverleaf model)
>PL191000252	Asp	GTC
                   t      GCCA aattttccag
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      + | | | |     A
      G     C G C G       G C G G G     C
      G     | | | |                 T T
      G     G C G C
        G A        A     AGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       G
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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