The detailed information of tRNA gene sequence


Sequence ID>PL191001201
Genome IDCP033217
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridioides difficile CD21062 plasmid:unnamed1 (CP033217)
Start position on genome 106036
End posion on genome 105951
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatcaccaat
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTTCGAAAGGGCC
GTGGGTTCGAATCCCACCCTCTCCGCaa
Downstream region at tRNA end position 
atgcccagat
Secondary structure (Cloverleaf model)
>PL191001201	Ser	TGA
                   t      GCaa atgcccagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTTCGAAAGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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