The detailed information of tRNA gene sequence


Sequence ID>PL191001301
Genome IDCP035511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHaematobacter massiliensis OT1 plasmid:pOT1-1 (CP035511)
Start position on genome 135705
End posion on genome 135780
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtcggtgtca
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCGTCTCGCTTACACCGAGAATGTCGGCGGTTCGAAC
CCGTCACGACCCACCA
Downstream region at tRNA end position 
tttttcgata
Secondary structure (Cloverleaf model)
>PL191001301	Val	TAC
                   a      ACCA tttttcgata
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          C A
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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