The detailed information of tRNA gene sequence


Sequence ID>PHG183000740
Genome IDKY963424
Search identical group
Phylum/ClassSiphoviridae
SpeciesShigella phage SSP1 (KY963424)
Start position on genome 109067
End posion on genome 109141
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaagttaaa
tRNA gene sequence 
GGTACTATAGTCTAACGGTTAGGATACTCCCCTGTCACGGGAGAGGTAGGGTTTCGATTA
CCCTTAGTACCGCCA
Downstream region at tRNA end position 
aactaaacta
Secondary structure (Cloverleaf model)
>PHG183000740	Asp	GTC
                   a      GCCA aactaaacta
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C A     A
      C A A        A      | | | | |     G
    G       T C T G       A G G G T     C
    G       + | | +                 T T
    T       G G A T
      T A          A     AGGT
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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