The detailed information of tRNA gene sequence


Sequence ID>PHG184000029
Genome IDMH153807
Search identical group
Phylum/ClassSiphoviridae
SpeciesRhodococcus phage Peregrin (MH153807)
Start position on genome 81679
End posion on genome 81752
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttgtgtcta
tRNA gene sequence 
GCCCATGAAGCTCAATTGGTGGTAGCGTCCGTCTCATACGCGGAAGGTCTCTGGTTCAAA
TCCAGACGTGGGCActc
Downstream region at tRNA end position 
tcaactaaga
Secondary structure (Cloverleaf model)
>PHG184000029	Met	CAT
                   a      Actc tcaactaaga
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     G - C          T A
                    A     A G A C C     A
      T A A        A      | | | | |     A
    T       C T C G       T C T G G     C
    G         | | |                 T T
    G       T A G C
      T G G        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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